Geodermatophilales
Geodermatophilales | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Actinomycetota |
Class: | Actinomycetia |
Order: | Geodermatophilales Sen et al. 2014[1] |
Type genus | |
Geodermatophilus Luedemann 1968 | |
Families[2] | |
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Synonyms | |
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The Geodermatophilales are an order of bacteria.[1][2] Members of the order are Gram-positive, aerobic, and can be motile. They mainly inhabit arid and degraded habitats but also marine and plant-associated environments. Members have pigmented colonies.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[4]
16S rRNA based LTP_08_2023[5][6][7] | 120 marker proteins based GTDB 08-RS214[8][9][10] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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See also
References
- ^ a b Sen A, Daubin V, Abrouk D, Gifford I, Berry AM, Normand P (2014). "Phylogeny of the class Actinobacteria revisited in the light of complete genomes. The orders "Frankiales" and Micrococcales should be split into coherent entities: Proposal of Frankiales ord. nov., Geodermatophilales ord. nov., Acidothermales ord. nov. and Nakamurellales ord. nov". Int J Syst Evol Microbiol. 64 (Pt 11): 3821–3832. doi:10.1099/ijs.0.063966-0. PMID 25168610.
- ^ a b c A.C. Parte; et al. "Geodermatophilales". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
- ^ del Carmen Montero-Calasanz, Maria (2020). "Geodermatophilales". In Whitman, William B. (ed.). Bergey's Manual of Systematics of Archaea and Bacteria (Online ed.). Wiley Online Library. doi:10.1002/9781118960608. ISBN 9781118960608. Retrieved April 24, 2023.
- ^ Sayers; et al. "Geodermatophilales". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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