PLCD4

Protein-coding gene in the species Homo sapiens
PLCD4
Identifiers
AliasesPLCD4, phospholipase C delta 4
External IDsOMIM: 605939; MGI: 107469; HomoloGene: 88782; GeneCards: PLCD4; OMA:PLCD4 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for PLCD4
Genomic location for PLCD4
Band2q35Start218,607,855 bp[1]
End218,637,184 bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for PLCD4
Genomic location for PLCD4
Band1 C4|1 38.54 cMStart74,582,047 bp[2]
End74,606,953 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • muscle of thigh

  • vastus lateralis muscle

  • gastrocnemius muscle

  • skeletal muscle tissue

  • Skeletal muscle tissue of rectus abdominis

  • biceps brachii

  • deltoid muscle

  • Skeletal muscle tissue of biceps brachii

  • tibialis anterior muscle

  • gastric mucosa
Top expressed in
  • medial head of gastrocnemius muscle

  • triceps brachii muscle

  • knee joint

  • vastus lateralis muscle

  • seminiferous tubule

  • spermatid

  • sternocleidomastoid muscle

  • spermatocyte

  • tibialis anterior muscle

  • skeletal muscle tissue
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • phosphoric diester hydrolase activity
  • phospholipase C activity
  • calcium ion binding
  • hydrolase activity
  • signal transducer activity
  • metal ion binding
  • phosphatidylinositol phospholipase C activity
Cellular component
  • plasma membrane
  • nuclear membrane
  • intracellular anatomical structure
  • endoplasmic reticulum
  • nucleus
  • membrane
  • cytoplasm
  • endoplasmic reticulum membrane
  • cytosol
Biological process
  • lipid catabolic process
  • acrosome reaction
  • intracellular signal transduction
  • phosphatidylinositol metabolic process
  • signal transduction
  • lipid metabolism
  • inositol phosphate metabolic process
  • inositol trisphosphate biosynthetic process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

84812

18802

Ensembl

ENSG00000115556

ENSMUSG00000026173

UniProt

Q9BRC7

Q8K3R3

RefSeq (mRNA)

NM_032726

NM_001081456
NM_148937

RefSeq (protein)

NP_116115

NP_001074925
NP_683739

Location (UCSC)Chr 2: 218.61 – 218.64 MbChr 1: 74.58 – 74.61 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

1-Phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 is an enzyme that in humans is encoded by the PLCD4 gene.[5][6][7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000115556 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026173 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Kim H, Suh PG, Ryu SH, Park SH (Apr 2000). "Assignment of the human PLC delta4 gene (PLCD4) to human chromosome band 2q35 by fluorescence in situ hybridization". Cytogenet Cell Genet. 87 (3–4): 254–5. doi:10.1159/000015437. PMID 10702683. S2CID 40877378.
  6. ^ Ghosh S, Pawelczyk T, Lowenstein JM (Jun 1997). "Phospholipase C isoforms delta 1 and delta 3 from human fibroblasts. High-yield expression in Escherichia coli, simple purification, and properties". Protein Expr Purif. 9 (2): 262–78. doi:10.1006/prep.1996.0682. PMID 9056492.
  7. ^ "Entrez Gene: PLCD4 phospholipase C, delta 4".

Further reading

  • Cefai D, Debre P, Kaczorek M, et al. (1991). "Human immunodeficiency virus-1 glycoproteins gp120 and gp160 specifically inhibit the CD3/T cell-antigen receptor phosphoinositide transduction pathway". J. Clin. Invest. 86 (6): 2117–24. doi:10.1172/JCI114950. PMC 329852. PMID 1979339.
  • Zauli G, Previati M, Caramelli E, et al. (1995). "Exogenous human immunodeficiency virus type-1 Tat protein selectively stimulates a phosphatidylinositol-specific phospholipase C nuclear pathway in the Jurkat T cell line". Eur. J. Immunol. 25 (9): 2695–700. doi:10.1002/eji.1830250944. PMID 7589147. S2CID 20562627.
  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Chen P, Mayne M, Power C, Nath A (1997). "The Tat protein of HIV-1 induces tumor necrosis factor-alpha production. Implications for HIV-1-associated neurological diseases". J. Biol. Chem. 272 (36): 22385–8. doi:10.1074/jbc.272.36.22385. PMID 9278385.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Mayne M, Bratanich AC, Chen P, et al. (1998). "HIV-1 tat molecular diversity and induction of TNF-alpha: implications for HIV-induced neurological disease". Neuroimmunomodulation. 5 (3–4): 184–92. doi:10.1159/000026336. PMID 9730685. S2CID 19529677.
  • Haughey NJ, Holden CP, Nath A, Geiger JD (1999). "Involvement of inositol 1,4,5-trisphosphate-regulated stores of intracellular calcium in calcium dysregulation and neuron cell death caused by HIV-1 protein tat". J. Neurochem. 73 (4): 1363–74. doi:10.1046/j.1471-4159.1999.0731363.x. PMID 10501179. S2CID 25410140.
  • Mayne M, Holden CP, Nath A, Geiger JD (2000). "Release of calcium from inositol 1,4,5-trisphosphate receptor-regulated stores by HIV-1 Tat regulates TNF-alpha production in human macrophages". J. Immunol. 164 (12): 6538–42. doi:10.4049/jimmunol.164.12.6538. PMID 10843712.
  • Ananthanarayanan B, Das S, Rhee SG, et al. (2002). "Membrane targeting of C2 domains of phospholipase C-delta isoforms". J. Biol. Chem. 277 (5): 3568–75. doi:10.1074/jbc.M109705200. PMID 11706040.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Bennasser Y, Badou A, Tkaczuk J, Bahraoui E (2003). "Signaling pathways triggered by HIV-1 Tat in human monocytes to induce TNF-alpha". Virology. 303 (1): 174–80. doi:10.1006/viro.2002.1676. PMID 12482669.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Lee SB, Várnai P, Balla A, et al. (2004). "The pleckstrin homology domain of phosphoinositide-specific phospholipase Cdelta4 is not a critical determinant of the membrane localization of the enzyme". J. Biol. Chem. 279 (23): 24362–71. doi:10.1074/jbc.M312772200. PMID 15037625.
  • Leung DW, Tompkins C, Brewer J, et al. (2004). "Phospholipase C δ-4 overexpression upregulates ErbB1/2 expression, Erk signaling pathway, and proliferation in MCF-7 cells". Mol. Cancer. 3: 15. doi:10.1186/1476-4598-3-15. PMC 420486. PMID 15140260.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Chae SW, Kim JM, Yun YP, et al. (2007). "Identification and analysis of the promoter region of the human PLC-delta4 gene". Mol. Biol. Rep. 34 (2): 69–77. doi:10.1007/s11033-006-9014-x. PMID 17394098. S2CID 24577383.
  • v
  • t
  • e
3.1.1: Carboxylic
ester hydrolases3.1.2: Thioesterase3.1.3: Phosphatase3.1.4:
Phosphodiesterase3.1.6: SulfataseNuclease (includes
deoxyribonuclease
and ribonuclease)
3.1.11-16:
Exonuclease
Exodeoxyribonuclease
Exoribonuclease
3.1.21-31:
Endonuclease
Endodeoxyribonuclease
Endoribonuclease
either deoxy- or ribo-    
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