Apolipoprotein C-I

APOC1
Struktur sedia ada
PDBPencarian ortolog: PDBe RCSB
Senarai kod PDB

1ALE, 1ALF, 1IOJ, 1OPP

Pengecam
AliasAPOC1, Apo-CI, ApoC-I, apo-CIB, apoC-IB, apolipoprotein C1, Apolipoprotein C-I
Pengecam-pengecam luaranOMIM: 107710 MGI: 88053 HomoloGene: 136749 GeneCards: APOC1
Kedudukan gen (Manusia)
Kromosom 19
Kr.Kromosom 19[1]
Kromosom 19
Kedudukan gen APOC1
Kedudukan gen APOC1
Jalur19q13.32Mula44,914,247 bp[1]
Tamat44,919,349 bp[1]
Corak ekspresi RNA
Bgee
HumanMouse (ortholog)
Top expressed in
  • right lobe of liver

  • left adrenal cortex

  • right adrenal cortex

  • nucleus accumbens

  • putamen

  • caudate nucleus

  • right lung

  • limpa

  • substantia nigra

  • Hipotalamus
Top expressed in
  • left lobe of liver

  • Pundi hempedu

  • bibir

  • blastocyst

  • brown adipose tissue

  • skin of external ear

  • Kantung yolka

  • transitional epithelium of urinary bladder

  • esofagus

  • tunica adventitia of aorta
More reference expression data
BioGPS
tiada data
Ontologi gen
Fungsi molekul
  • phospholipase inhibitor activity
  • lipase inhibitor activity
  • phosphatidylcholine binding
  • fatty acid binding
  • phosphatidylcholine-sterol O-acyltransferase activator activity
Komponen sel
  • Kilomikron
  • very-low-density lipoprotein particle
  • Jalinan endoplasma
  • high-density lipoprotein particle
  • extracellular region
Proses biologi
  • lipid transport
  • chylomicron remnant clearance
  • negative regulation of fatty acid biosynthetic process
  • Metabolisme lipid
  • positive regulation of cholesterol esterification
  • phospholipid efflux
  • cholesterol metabolic process
  • negative regulation of phosphatidylcholine catabolic process
  • plasma lipoprotein particle remodeling
  • negative regulation of very-low-density lipoprotein particle clearance
  • regulation of cholesterol transport
  • negative regulation of receptor-mediated endocytosis
  • high-density lipoprotein particle remodeling
  • cholesterol efflux
  • negative regulation of cholesterol transport
  • negative regulation of lipoprotein lipase activity
  • very-low-density lipoprotein particle assembly
  • negative regulation of lipid catabolic process
  • triglyceride metabolic process
  • negative regulation of lipid metabolic process
  • positive regulation of catalytic activity
  • very-low-density lipoprotein particle clearance
  • lipoprotein metabolic process
Sumber:Amigo / QuickGO
Ortolog
SpesiesManusiaMencit
Entrez

341

11812

Ensembl

ENSG00000130208

ENSMUSG00000040564

UniProt

P02654

P34928

RefSeq (mRNA)

NM_001645
NM_001321065
NM_001321066
NM_001379687

NM_001110009
NM_007469

RefSeq (protein)

NP_001307994
NP_001307995
NP_001636
NP_001366616

NP_001103479
NP_031495

Kedudukan (UCSC)Chr 19: 44.91 – 44.92 Mbtiada data
Carian PubMed[2][3]
Wikidata
Papar/Sunting data manusiaPapar/Sunting data mencit
ApoC-I
Struktur perencat protein plasma kolesteril ester transferase Papio sp.
Pengenal pasti
SimbolApoC-I
PfamPF04691
InterProIPR006781
SCOP1ale
SUPERFAMILY1ale
Struktur protein yang tersedia:
Pfamstruktur
PDBRCSB PDB; PDBe; PDBj
PDBsumringkasan struktur

Apolipoprotein C-I, juga dikenali sebagai APOC1, ialah gen manusia.

Protein yang dikod oleh gen ini ialah ahli famili apolipoprotein C1. Gen ini dinyatakan terutamanya di dalam hati dan diaktifkan apabila monosit dibezakan menjadi makrofaj. Satu pseudogen bagi gen ini terletak 4 kb ke hilir pada orientasi yang sama di dalam kromosom yang sama. Gen ini dipetakan pada kromosom 19 and menghuni di dalam kelompok gen apoliprotein. Varian-varian transkrip bersambat telah dijumpai untuk gen ini, tetapi kesahan biologi bagi sesetengah varian masih tidak dapat ditentukan.[4]

Rujukan

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000130208 - Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Entrez Gene: APOC1 apolipoprotein C-I".

Bacaan tambahan

  • Shulman RS, Herbert PN, Wehrly K, Fredrickson DS (1975). "Thf complete amino acid sequence of C-I (apoLp-Ser), an apolipoprotein from human very low density lipoproteins". J. Biol. Chem. 250 (1): 182–90. PMID 166984.CS1 maint: multiple names: authors list (link)
  • Lauer SJ, Walker D, Elshourbagy NA; dll. (1988). "Two copies of the human apolipoprotein C-I gene are linked closely to the apolipoprotein E gene". J. Biol. Chem. 263 (15): 7277–86. PMID 2835369. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Smit M, van der Kooij-Meijs E, Woudt LP; dll. (1988). "Exact localization of the familial dysbetalipoproteinemia associated HpaI restriction site in the promoter region of the APOC1 gene". Biochem. Biophys. Res. Commun. 152 (3): 1282–8. doi:10.1016/S0006-291X(88)80424-8. PMID 2897845. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Tata F, Henry I, Markham AF; dll. (1985). "Isolation and characterisation of a cDNA clone for human apolipoprotein CI and assignment of the gene to chromosome 19". Hum. Genet. 69 (4): 345–9. doi:10.1007/BF00291654. PMID 2985493. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Davison PJ, Norton P, Wallis SC; dll. (1986). "There are two gene sequences for human apolipoprotein CI (apo CI) on chromosome 19, one of which is 4 kb from the gene for apo E.". Biochem. Biophys. Res. Commun. 136 (3): 876–84. doi:10.1016/0006-291X(86)90414-6. PMID 3013172. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Myklebost O, Rogne S (1986). "The gene for human apolipoprotein CI is located 4.3 kilobases away from the apolipoprotein E gene on chromosome 19". Hum. Genet. 73 (4): 286–9. doi:10.1007/BF00279087. PMID 3017837.
  • Jackson RL, Sparrow JT, Baker HN; dll. (1974). "The primary structure of apolopoprotein-serine". J. Biol. Chem. 249 (16): 5308–13. PMID 4369340. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Knott TJ, Robertson ME, Priestley LM; dll. (1984). "Characterisation of mRNAs encoding the precursor for human apolipoprotein CI". Nucleic Acids Res. 12 (9): 3909–15. doi:10.1093/nar/12.9.3909. PMID 6328444. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Servillo L, Brewer HB, Osborne JC (1981). "Evaluation of the mixed interaction between apolipoproteins A-II and C-I equilibrium sedimentation". Biophys. Chem. 13 (1): 29–38. doi:10.1016/0301-4622(81)80022-1. PMID 6789904.CS1 maint: multiple names: authors list (link)
  • Curry MD, McConathy WJ, Fesmire JD, Alaupovic P (1981). "Quantitative determination of apolipoproteins C-I and C-II in human plasma by separate electroimmunoassays". Clin. Chem. 27 (4): 543–8. PMID 7471419.CS1 maint: multiple names: authors list (link)
  • Rozek A, Buchko GW, Cushley RJ (1995). "Conformation of two peptides corresponding to human apolipoprotein C-I residues 7-24 and 35-53 in the presence of sodium dodecyl sulfate by CD and NMR spectroscopy". Biochemistry. 34 (22): 7401–8. doi:10.1021/bi00022a013. PMID 7779782.CS1 maint: multiple names: authors list (link)
  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Trask B, Fertitta A, Christensen M; dll. (1993). "Fluorescence in situ hybridization mapping of human chromosome 19: cytogenetic band location of 540 cosmids and 70 genes or DNA markers". Genomics. 15 (1): 133–45. doi:10.1006/geno.1993.1021. PMID 8432525. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Kamino K, Yoshiiwa A, Nishiwaki Y; dll. (1996). "Genetic association study between senile dementia of Alzheimer's type and APOE/C1/C2 gene cluster". Gerontology. 42: 12–9. doi:10.1159/000213820. PMID 8804993. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Rozek A, Buchko GW, Kanda P, Cushley RJ (1998). "Conformational studies of the N-terminal lipid-associating domain of human apolipoprotein C-I by CD and 1H NMR spectroscopy". Protein Sci. 6 (9): 1858–68. doi:10.1002/pro.5560060906. PMID 9300485.CS1 maint: multiple names: authors list (link)
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K; dll. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Halushka MK, Fan JB, Bentley K; dll. (1999). "Patterns of single-nucleotide polymorphisms in candidate genes for blood-pressure homeostasis". Nat. Genet. 22 (3): 239–47. doi:10.1038/10297. PMID 10391210. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Freitas EM, Zhang WJ, Lalonde JP; dll. (1999). "Sequencing of 42kb of the APO E-C2 gene cluster reveals a new gene: PEREC1". DNA Seq. 9 (2): 89–100. doi:10.3109/10425179809086433. PMID 10520737. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Gautier T, Masson D, de Barros JP; dll. (2001). "Human apolipoprotein C-I accounts for the ability of plasma high density lipoproteins to inhibit the cholesteryl ester transfer protein activity". J. Biol. Chem. 275 (48): 37504–9. doi:10.1074/jbc. Check |doi= value (bantuan). PMID 10978346. Explicit use of et al. in: |author= (bantuan)CS1 maint: multiple names: authors list (link)
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMID 11076863.CS1 maint: multiple names: authors list (link)
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Lipid: metabolisme zarah lipoprotein
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